image processing toolbox function imregtform Search Results


rigid translation based alignment  (MathWorks Inc)
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Rigid Translation Based Alignment, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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image processing toolbox function imregtform  (MathWorks Inc)
90
MathWorks Inc image processing toolbox function imregtform
Image Processing Toolbox Function Imregtform, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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matlab function imregtform  (MathWorks Inc)
90
MathWorks Inc matlab function imregtform
A general-purpose microscope control software Micro-manager and a custom <t>MATLAB</t> script were combined to enable automated multi-modal measurements. Under Micro-manager, a Raman channel was registered as a ‘dummy’ channel along with brightfield and fluorescence channels. Micro-manager was responsible for changing the field of view (FOV) and imaging modality. During the Raman sequence, Micro-manager communicated with a digital acquisition (DAQ) board, through which a transistor-to-transistor logic (TTL) signal was generated to initiate the scanning sequence. Upon detection of the TTL signal, the MATLAB script controlled the Raman detector, laser shutter, and updated the galvo mirror angles through the DAQ board.
Matlab Function Imregtform, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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built-in function imregtform  (MathWorks Inc)
90
MathWorks Inc built-in function imregtform
A general-purpose microscope control software Micro-manager and a custom <t>MATLAB</t> script were combined to enable automated multi-modal measurements. Under Micro-manager, a Raman channel was registered as a ‘dummy’ channel along with brightfield and fluorescence channels. Micro-manager was responsible for changing the field of view (FOV) and imaging modality. During the Raman sequence, Micro-manager communicated with a digital acquisition (DAQ) board, through which a transistor-to-transistor logic (TTL) signal was generated to initiate the scanning sequence. Upon detection of the TTL signal, the MATLAB script controlled the Raman detector, laser shutter, and updated the galvo mirror angles through the DAQ board.
Built In Function Imregtform, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
built-in function imregtform - by Bioz Stars, 2026-04
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imregtform  (MathWorks Inc)
90
MathWorks Inc imregtform
A general-purpose microscope control software Micro-manager and a custom <t>MATLAB</t> script were combined to enable automated multi-modal measurements. Under Micro-manager, a Raman channel was registered as a ‘dummy’ channel along with brightfield and fluorescence channels. Micro-manager was responsible for changing the field of view (FOV) and imaging modality. During the Raman sequence, Micro-manager communicated with a digital acquisition (DAQ) board, through which a transistor-to-transistor logic (TTL) signal was generated to initiate the scanning sequence. Upon detection of the TTL signal, the MATLAB script controlled the Raman detector, laser shutter, and updated the galvo mirror angles through the DAQ board.
Imregtform, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/imregtform/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
imregtform - by Bioz Stars, 2026-04
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imregtform.m  (MathWorks Inc)
90
MathWorks Inc imregtform.m
A general-purpose microscope control software Micro-manager and a custom <t>MATLAB</t> script were combined to enable automated multi-modal measurements. Under Micro-manager, a Raman channel was registered as a ‘dummy’ channel along with brightfield and fluorescence channels. Micro-manager was responsible for changing the field of view (FOV) and imaging modality. During the Raman sequence, Micro-manager communicated with a digital acquisition (DAQ) board, through which a transistor-to-transistor logic (TTL) signal was generated to initiate the scanning sequence. Upon detection of the TTL signal, the MATLAB script controlled the Raman detector, laser shutter, and updated the galvo mirror angles through the DAQ board.
Imregtform.M, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/imregtform.m/product/MathWorks Inc
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imregtform.m - by Bioz Stars, 2026-04
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matlab imregtform command  (MathWorks Inc)
90
MathWorks Inc matlab imregtform command
A general-purpose microscope control software Micro-manager and a custom <t>MATLAB</t> script were combined to enable automated multi-modal measurements. Under Micro-manager, a Raman channel was registered as a ‘dummy’ channel along with brightfield and fluorescence channels. Micro-manager was responsible for changing the field of view (FOV) and imaging modality. During the Raman sequence, Micro-manager communicated with a digital acquisition (DAQ) board, through which a transistor-to-transistor logic (TTL) signal was generated to initiate the scanning sequence. Upon detection of the TTL signal, the MATLAB script controlled the Raman detector, laser shutter, and updated the galvo mirror angles through the DAQ board.
Matlab Imregtform Command, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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functions imregconfig and imregtfrom  (MathWorks Inc)
90
MathWorks Inc functions imregconfig and imregtfrom
A general-purpose microscope control software Micro-manager and a custom <t>MATLAB</t> script were combined to enable automated multi-modal measurements. Under Micro-manager, a Raman channel was registered as a ‘dummy’ channel along with brightfield and fluorescence channels. Micro-manager was responsible for changing the field of view (FOV) and imaging modality. During the Raman sequence, Micro-manager communicated with a digital acquisition (DAQ) board, through which a transistor-to-transistor logic (TTL) signal was generated to initiate the scanning sequence. Upon detection of the TTL signal, the MATLAB script controlled the Raman detector, laser shutter, and updated the galvo mirror angles through the DAQ board.
Functions Imregconfig And Imregtfrom, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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matlab's built-in algorithm imregtform  (MathWorks Inc)
90
MathWorks Inc matlab's built-in algorithm imregtform
A general-purpose microscope control software Micro-manager and a custom <t>MATLAB</t> script were combined to enable automated multi-modal measurements. Under Micro-manager, a Raman channel was registered as a ‘dummy’ channel along with brightfield and fluorescence channels. Micro-manager was responsible for changing the field of view (FOV) and imaging modality. During the Raman sequence, Micro-manager communicated with a digital acquisition (DAQ) board, through which a transistor-to-transistor logic (TTL) signal was generated to initiate the scanning sequence. Upon detection of the TTL signal, the MATLAB script controlled the Raman detector, laser shutter, and updated the galvo mirror angles through the DAQ board.
Matlab's Built In Algorithm Imregtform, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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imregtform function  (MathWorks Inc)
90
MathWorks Inc imregtform function
A general-purpose microscope control software Micro-manager and a custom <t>MATLAB</t> script were combined to enable automated multi-modal measurements. Under Micro-manager, a Raman channel was registered as a ‘dummy’ channel along with brightfield and fluorescence channels. Micro-manager was responsible for changing the field of view (FOV) and imaging modality. During the Raman sequence, Micro-manager communicated with a digital acquisition (DAQ) board, through which a transistor-to-transistor logic (TTL) signal was generated to initiate the scanning sequence. Upon detection of the TTL signal, the MATLAB script controlled the Raman detector, laser shutter, and updated the galvo mirror angles through the DAQ board.
Imregtform Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/imregtform function/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
imregtform function - by Bioz Stars, 2026-04
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Image Search Results


A general-purpose microscope control software Micro-manager and a custom MATLAB script were combined to enable automated multi-modal measurements. Under Micro-manager, a Raman channel was registered as a ‘dummy’ channel along with brightfield and fluorescence channels. Micro-manager was responsible for changing the field of view (FOV) and imaging modality. During the Raman sequence, Micro-manager communicated with a digital acquisition (DAQ) board, through which a transistor-to-transistor logic (TTL) signal was generated to initiate the scanning sequence. Upon detection of the TTL signal, the MATLAB script controlled the Raman detector, laser shutter, and updated the galvo mirror angles through the DAQ board.

Journal: bioRxiv

Article Title: Raman2RNA: Live-cell label-free prediction of single-cell RNA expression profiles by Raman microscopy

doi: 10.1101/2021.11.30.470655

Figure Lengend Snippet: A general-purpose microscope control software Micro-manager and a custom MATLAB script were combined to enable automated multi-modal measurements. Under Micro-manager, a Raman channel was registered as a ‘dummy’ channel along with brightfield and fluorescence channels. Micro-manager was responsible for changing the field of view (FOV) and imaging modality. During the Raman sequence, Micro-manager communicated with a digital acquisition (DAQ) board, through which a transistor-to-transistor logic (TTL) signal was generated to initiate the scanning sequence. Upon detection of the TTL signal, the MATLAB script controlled the Raman detector, laser shutter, and updated the galvo mirror angles through the DAQ board.

Article Snippet: Lastly, as smFISH consisted of 3 rounds of hybridization and imaging, the following steps were performed to register images across different rounds with a custom MATLAB script: Maximum intensity projection of nuclei stain and RNA images Automatic registration of round 1 images to rounds 2 and 3 based on nuclei stain images and MATLAB function imregtform .

Techniques: Microscopy, Control, Software, Fluorescence, Imaging, Sequencing, Generated